PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.1G049600.5.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 444aa    MW: 47350.4 Da    PI: 9.2035
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.1G049600.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.8e-11117157343
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                         + k  rr+++NReAAr+sR+RKka+i++Le+    L++  +
  Sevir.1G049600.5.p 117 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRIRLSQLEQ 157
                         67999*************************86555555444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.1E-8115161No hitNo description
SMARTSM003386.4E-5115168IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.979117161IPR004827Basic-leucine zipper domain
PfamPF001701.0E-8118157IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-7119162No hitNo description
PROSITE patternPS000360122137IPR004827Basic-leucine zipper domain
PfamPF141445.4E-27203288IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MAEFDQALFL YLNSQDQTSA AHHQDQPQTL NIFPSQPMHI AEPAPKGSMG TSNTAPIAGA  60
GPSKQPPPPS NHPSRPTPAA LKDGKPAGVK REGSSGAATG SGTPSTSNQQ EGPRTPDAKT  120
LRRLAQNREA ARKSRLRKKA YIQNLETSRI RLSQLEQELH RSRNQGAVFG GGALSGSNGG  180
LSPEAAWFDM EHARWQEEHG KMMRHLRAAL EAADQQHPAA PAPAPAADAQ LRQLVDAAAA  240
HHGVLADLKA AVASADAFHL VSGAWASAAE RCFLWIGGFR PSELIKVAAR HAEPLTEPQA  300
MGVCGVQQWA REAEAALDHE LQAMHRSVSE AVSSDAAALL CPYSDVPGYM ATMSLAIAKL  360
ASLEAFVRQA DALRLQALHR LPQILTARQA ARCFLAIADY SHRLRALSEL WHTRPRHEPV  420
ATIPAAGPSH GQPFQSSRAG GLL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9513162e-57EU951316.1 Zea mays clone 695528 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004951577.10.0PREDICTED: transcription factor TGA2-like isoform X2
SwissprotQ415581e-95HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A096Q9020.0A0A096Q902_MAIZE; Uncharacterized protein
TrEMBLC5XXG40.0C5XXG4_SORBI; Putative uncharacterized protein Sb04g006500
STRINGSb04g006500.10.0(Sorghum bicolor)
STRINGGRMZM2G029979_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.38e-99bZIP family protein